mebs

Welcome to the new MEBS location

The development of https://github.com/eead-csic-compbio/metagenome_Pfam_score and any updates and new versions of MEBS will be posted on this new website.

The code is regularly patched see CHANGES.txt regurarly.

MEBS has been used in a variety of studies (see citing papers here)

We kindly ask you to report errors or bugs in the program in the issues section of the github and to acknowledge the use of the program in scientific publications.

Citation

De Anda V, Zapata-Peñasco I, Poot-Hernandez AC, Eguiarte LE, Contreras-Moreira B, Souza V. MEBS, a software platform to evaluate large (meta)genomic collections according to their metabolic machinery: unraveling the sulfur cycle. Gigascience. 2017 Nov 1;6(11):1-17. doi: 10.1093/gigascience/gix096. PMID: 29069412; PMCID: PMC5737871.

Installation and instructions

Installation instructions are summarized on README.txt and full documentation is available for each version:

version	Release	Link
MEBS v1.2	October 2021	manual
MEBS v1.1	October 2018	manual
MEBS v1.0	October 2017	manual-pdf

Video workshop

contents	minutes	URL
Val’s Bio	3:05	https://www.youtube.com/watch?v=j5WmsbTaro4
Introduction	11:46	https://www.youtube.com/watch?v=ezc7yFnnMI0
Description	15:54	https://www.youtube.com/watch?v=wpCG7MvqQc8
Functionality	18:46	https://www.youtube.com/watch?v=ufF2q23w7nU
Hands-on	27:29	https://www.youtube.com/watch?v=8p37ktWWgGc